Data format class | General data- | Nucleotide sequence | Protein sequence | Structural | Sequence | Other data |
---|---|---|---|---|---|---|
 | interchange formats | data | data | data | alignment | types (PPI, etc) |
Tabl | CSV, TSV | BED; GFF | GFF, Uniprot-GFF | PSF(D), MMCIF(D) | SAM(D) | Â |
FASTA-like | Â | FASTA; FASTQ | FASTA, PIR | Â | SAM(M) | Wig |
GenBank-like | Â | GenBank; EMBL | Uniprot-TEXT | PDB, PSF(M), MMCIF(D) | CLUSTAL, MSF, | Â |
 |  |  |  |  | PHYLIP(D) |  |
Tag-structured | HTML; XML; JSON | SBOL-XML | Uniprot-XML; | Â | Â | PSI MI-XML; |
 |  |  | Uniprot-RDF/XML |  |  | PSI-PAR |