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Table 2 List of data standards initiatives

From: Data integration in biological research: an overview

Acronym

Name

Goal

URL

PMID

OBO

The Open Biological and

Establish a set of principles for ontology

http://www.obofoundry.org

17989687

 

Biomedical Ontologies

development to create a suite of orthogonal

  
  

interoperable reference ontologies in

  
  

the biomedical domain

  

CDISC

Clinical data interchange

Establish standards to support the acquisition,

http://www.cdisc.org

23833735

 

standards consortium

exchange, submission and archive of

  
  

clinical research data and metadata

  

HUPO-PSI

Human Proteome Organisation-

Defines community standards for data

http://www.psidev.info

16901219

 

Proteomics Standards Initiative

representation in proteomics to facilitate

  
  

data comparison, exchange and verification

  

GAGH

Global Alliance for Genomics

Create interoperable approaches to catalyze

http://genomicsandhealth.org/

24896853

 

and Health

projects that will help unlock the great

  
  

potential of genomic data

  

COMBINE

Computational Modeling

Coordinate the development of the various

http://co.mbine.org/

25759811

 

in Biology

community standards and formats for

  
  

computational models

  

MSI

Metabolomics Standards

Define community-agreed reporting

http://msi-workgroups.sourceforge.net

17687353

 

Initiative

standards, which provided a clear description

  
  

of the biological system studied and

  
  

all components of metabolomics studies

  

RDA

Research Data Alliance

Builds the social and technical bridges that

https://rd-alliance.org

 
  

enable open sharing of data across multiple

  
  

scientific disciplines

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