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Table 2 Spectrum of genes analyzed in PBL and in SCC out of milk and the classification of their regulation

From: Immune cell counts and signaling in body fluids of cows vaccinated against Clostridium difficile

Genes

Performed gene expression analysis

Classification of the gene regulation

In PBL

In SCC

In PBL

In SCC

bMEC′-related genes

 KRT8

No

Yes

/

+

 PIGRa

No

Yes

/

++

 FcRNa

No

Yes

/

0

 C1QAa

No

Yes

/

0

 C3a

No

Yes

/

+

 CCL5a

No

Yes

/

+

 CCL20a

No

yes

/

++

 CCL28a

No

Yes

/

+

 CXCL3a

No

Yes

/

+

 CXCL5a

No

Yes

/

0

 CXCL8a

No

Yes

/

+

 LPOa

No

Yes

/

++

 LFa

No

Yes

/

+

 LYZ1a

No

Yes

/

+

 TAPa

No

Yes

/

+

Phagocyte-related genes

 C3AR1

Yes

Yes

+

+

 C5AR1

Yes

Yes

+

++

 CXCR2

Yes

Yes

+

+

 TLR2

Yes

Yes

+

+

 CD163

Yes

Yes

+

0

 CXCL8

Yes

See above

+

See above

 TNFα

Yes

Yes

+

++

 IL1β

Yes

Yes

++

+

 IL6

Yes

Yes

+++

+

 IL12β

Yes

Yes

++

+

Lymphocyte-related genes

 CD3δ

Yes

Yes

+++

+

 CD4

Yes

Yes

++

++

 CD8β

Yes

Yes

++

+

 CD19

Yes

Yes

+

+

 CD38

No

Yes

/

+

 CD126

Yes

Yes

+++

+

 CCR6

No

Yes

/

+

 IFNγ

Yes

Yes

+

+

 TGFβ1

Yes

No

+

/

 IL2

Yes

No

+++

/

 IL10

Yes

Yes

+

++

  1. PBL peripheral blood leukocytes, SCC somatic cell count, bMEC bovine epithelial cells
  2. a characterizes the bMEC-related genes, which were additionally normalized with KRT8 as the epithelial cell marker; the sign / means that the gene expression was not analyzed in the study objects, PBL or SCC