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Table 3 The significantly enriched pathways among the DEGs between the pregnant and nonpregnant

From: Comparative analysis of differentially expressed genes between the ovaries from pregnant and nonpregnant goats using RNA-Seq

Pathway

DEGs with pathway annotation (1413)

All genes with pathway annotation (22,885)

p value

Q value

Pathway ID

Complement and coagulation cascades

51 (3.61%)

235 (1.03%)

2.05E−15

4.95E−13

ko04610

Staphylococcus aureus infection

33 (2.34%)

181 (0.79%)

1.88E−08

2.28E−06

ko05150

Hematopoietic cell lineage

30 (2.12%)

212 (0.93%)

1.87E−05

1.21E−03

ko04640

Bile secretion

28 (1.98%)

192 (0.84%)

2.00E−05

1.21E−03

ko04976

Cytokine–cytokine receptor interaction

46 (3.26%)

395 (1.73%)

2.70E−05

1.31E−03

ko04060

DNA replication

12 (0.85%)

51 (0.22%)

4.89E−05

1.97E−03

ko03030

Systemic lupus erythematosus

31 (2.19%)

241 (1.05%)

8.77E−05

3.03E−03

ko05322

Axon guidance

44 (3.11%)

403 (1.76%)

0.000178193

5.39E−03

ko04360

Pertussis

23 (1.63%)

177 (0.77%)

0.000587109

1.58E−02

ko05133

Cell cycle

31 (2.19%)

273 (1.19%)

0.000795974

1.93E−02

ko04110

Vitamin digestion and absorption

13 (0.92%)

78 (0.34%)

0.000920767

2.03E−02

ko04977

Steroid biosynthesis

10 (0.71%)

54 (0.24%)

0.001541861

3.11E−02

ko00100