Skip to main content

Table 1 List of cDNA datasets

From: Genome-scale meta-analysis of breast cancer datasets identifies promising targets for drug development

Dataset Accession No. Total samples Tissues Species Conditions/type Platform Size of arrays AffyIDs References
GSE83325 4 Breast cancer Homo sapiens Control vs. treated GPL15207 [PrimeView] Affymetrix Human Gene Expression Array 732 × 732 features 49495 [35]
GSE28645 14 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [36]
GSE28448 11 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [37]
GSE27444 14 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [38]
GSE12791 16 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 712 × 712 features 22283 [39]
GSE33658 22 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [40]
GSE116781 6 Breast cancer Homo sapiens Control vs. treated GPL15207 [PrimeView] Affymetrix Human Gene Expression Array 732 × 732 features 49495 [41]
GSE146911 11 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [42]
GSE151635 12 Breast cancer Homo sapiens Control vs. treated GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array 732 × 732 features 22277 [43]
GSE71363 18 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [44]
GSE99860 16 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [45]
GSE99861 16 Breast cancer Homo sapiens Control vs. treated GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array 1164 × 1164 features 54675 [46]