Table 3 Eleven overlapped S. linearistipularis pathways with Arabidopsis sp.
From: NaCl stress-induced transcriptomics analysis of Salix linearistipularis (syn. Salix mongolica)
Pathway | GeneID | Gene annotation | Log2(SLH-Treated_FPKM/SLH-Control_FPKM) | FDR |
|---|---|---|---|---|
Ubiquinone and other terpenoid-quinone biosynthesis | CL9057.Contig1_All | 1,4-Dihydroxy-2-naphthoyl-CoA synthase | 1.5475 | 1.39 × 10−03 |
Isoquinoline alkaloid biosynthesis | Unigene2060_All | aminotransferase family protein | 0.6377 | 1.07 × 10−07 |
Nicotinate and nicotinamide metabolism | Unigene24510_All | SufE-like protein | 1.1473 | 4.24 × 10−03 |
Non-homologous end-joining | Unigene15563_All | DNA repair protein RAD50 | −1.4166 | 8.52 × 10−04 |
Homologous recombination | Unigene15563_All |  | −1.4166 | 8.52 × 10−04 |
Ascorbate and aldarate metabolism | Unigene9728_All | Inositol oxygenase 1 | 0.9425 | 2.06 × 10−10 |
CL5877.Contig2_All | Inositol oxygenase 2 | 0.6185 | 4.80 × 10−05 | |
Phosphatidylinositol signaling system | CL1261.Contig1_All | predicted protein | −0.713 | 6.60 × 10−04 |
CL8598.Contig2_All | predicted protein | −2.4993 | 2.96 × 10−03 | |
Inositol phosphate metabolism | CL5625.Contig1_All | predicted protein | −1.3322 | 7.07 × 10−04 |
Fructose and mannose metabolism | CL2465.Contig5_All | predicted protein | 0.8893 | 9.94 × 10−06 |
Biosynthesis of unsaturated fatty acids | CL4746.Contig1_All | Acyl-coenzyme A oxidase 3 | 0.6963 | 6.79 × 10−29 |
Pentose and glucuronateinterconversions | CL9179.Contig1_All | putativepectatelyase 2 | −2.1229 | 6.99 × 10−07 |