Table 1 List of cDNA datasets
Accession No. | Total samples | Tissues | Species | Conditions/type | Platform | Size of arrays | AffyIDs | References |
|---|---|---|---|---|---|---|---|---|
GSE 9412 | 6 | Colorectal cancer | Homo sapiens | Sensitive vs resistant | GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array | 732x732 features | 22277 | Selga et al. [34] |
GSE 11440 | 6 | Colon | Homo sapiens | Sensitive vs resistant | GPL570 [HG-U133_Plus_2] U133 Plus 2.0 Array | 1164x1164 features | 54675 | Mencia et al. [35] |
GSE14773 | 8 | Colon | Homo sapiens | Control vs treated | GPL570 [HG-U133_Plus_2] U133 Plus 2.0 Array | 1164x1164 features | 54675 | Hwang et al. [36] |
GSE 15102 | 8 | Colon | Homo sapiens | Control vs treated | GPL571 [HG-U133A_2] Affymetrix Human Genome U133A 2.0 Array | 732x732 features | 22277 | Sagiv et al. [37] |
GSE 18560 | 12 | Colorectal | Homo sapiens | Control vs treated | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Selga et al. [34] |
GSE 27157 | 10 | Colorectal cancer | Homo sapiens | p53 wild vs. tumor samples | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Katkoori et al. [38] |
GSE 29316 | 6 | Colon fibroblast | Homo sapiens | Control vs treated | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Chen et al. [39] |
GSE 32323 | 44 | Colorectal cancer | Homo sapiens | Control vs Treated | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Khamas et al. [40] |
GSE 35144 | 64 | Colorect cancer | Homo sapiens | Case vs control | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Uronis et al. [41] |
GSE 55624 | 18 | Colorectal cancer | Homo sapiens | Control vs treated | GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array | 1164x1164 features | 54675 | Schoumacher et al. [42] |